home > bioproject > PRJDB5490
identifier PRJDB5490
type bioproject
sameAs
organism Danio rerio
title Fine selection of up-regulated genes duirng ovulation by in vivo induction of oocyte maturation and ovulation in zebrafish
description Two essential processes, oocyte maturation and ovulation, before oocytes become fertilizable that are independently induced but co-operatively proceeded at the final step in oogenesis. Eventhough these two processes are induced by same maturation-inducing steroid, 17, 20 beta-dihydroxy-4-pregnen-3-one (17, 20 beta-DHP), in teleost, the receptor for each pathway is suggested to be different and thus signal transduction pathways are different. While much progresses achieved on the molecular mechanisms for induction of oocyte maturation, the mechanisms to induce ovulation is under elucidation. Previously we established the procedure that can make it possible to prepare the ovarian tissue which contains oocyte maturation-induced oocytes in vivo. In the same way, ovulation can be induced in alive zebrafish. Thus it became possible to select the genes up-regulated according to ovulation by compare the gene expression between maturation-inducing genes in matured oocytes and both maturation and ovulation-inducing genes in ovulated eggs. In vivo bioassay has been applied to prepare maturated and ovulated ovarian samples. Specifically up-regulated genes to induce ovulation will be selected by RNA-seq analysis. The mRNA abundance of highly up-regulated genes will be confirmed by q-PCR analysis. By this project, ovulation-inducing genes will be selected and its roles in induction of ovulation will be addressed in the future.
data type Transcriptome or Gene Expression
publication
properties 
{...}
dbXrefs
sra-run  DRR084187DRR084188DRR084189DRR084190DRR084191DRR084192DRR084193DRR084194DRR084195DRR084196 More
sra-submission  DRA005484
biosample  SAMD00073594SAMD00073595SAMD00073596SAMD00073597SAMD00073598SAMD00073599SAMD00073600SAMD00073601SAMD00073602SAMD00073603 More
sra-study  DRP004758
sra-sample  DRS086512DRS086513DRS086514DRS086515DRS086516DRS086517DRS086518DRS086519DRS086520DRS086521 More
sra-experiment  DRX078018DRX078019DRX078020DRX078021DRX078022DRX078023DRX078024DRX078025DRX078026DRX078027 More
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status public
visibility unrestricted-access
dateCreated 2017-01-23T01:50:12+09:00
dateModified 2019-01-23T13:02:17+09:00
datePublished 2019-01-23T13:02:16+09:00