home > bioproject > PRJDB5517
identifier PRJDB5517
type bioproject
sameAs
organism Acidovorax sp. NB1
title Genome sequencing of Acidovorax sp. NB1
description Nitrite-oxidizing bacteria (NOB) catalyze nitrite to nitrate, the second step of nitrification, which prevents accumulation of toxic nitrite and produces nitrate as nitrogen source for plants. NOB cells are not planktonic but tend to form complex microbial aggregates. However, little is known about the interaction of NOB and heterotrophic microorganisms. Previously, we identified Acidovorax sp. agglomerated in cold-adapted nitrite oxidizer Nitrotoga cells. The close spatial coaggregation might reflect specific microbe-microbe interaction, which is mutualistic, commensalistic, or even parasitic. The nitrite oxidation activity is affected by signaling compounds and metabolites released from other bacteria. The aim of study is identification of the genes encoded in Acidovorax sp., which regulate the activity of Nitrotoga
data type Genome Sequencing
publication
properties 
{...}
dbXrefs
sra-run  DRR086902
sra-submission  DRA005521
biosample  SAMD00074225
sra-study  DRP005091
sra-sample  DRS095353
sra-experiment  DRX080731
distribution JSONJSON-LD
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status public
visibility unrestricted-access
dateCreated 2017-02-01T06:08:45+09:00
dateModified 2019-05-20T05:06:28+09:00
datePublished 2019-04-17T00:51:43+09:00