home > bioproject > PRJDB5706
identifier PRJDB5706
type bioproject
sameAs
organism Oryza sativa
title Genome diversity and regional adaptation of rice
description A number of 7 cultivated rice genomes, which have been used as doners for the development of CSSLs are resequenced in depth (average coverage=52X) by using the NGS technology. Mapping of the NGS reads to the Nipponbare reference genome is performed for comparative genomics to characterize the sequence diversity for a number of heading-date related genes within the population of Asian cultivated rice . Our results provide important evidence for understanding of the evolutionary mechanisms and functional roles of these genes on the regional adaptation of rice cultivars.
data type Genome Sequencing
publication
external link
Institute of Crop Science, Database
properties 
{...}
dbXrefs
sra-run  DRR093954DRR093955DRR093956DRR093957DRR093958DRR093959DRR093960DRR093961DRR093962DRR093963 More
sra-submission  DRA005866
biosample  SAMD00078852SAMD00078853SAMD00078854SAMD00078855SAMD00078856SAMD00078857SAMD00078858
sra-study  DRP004186
sra-sample  DRS062105DRS062106DRS062107DRS062108DRS062109DRS062110DRS062111
sra-experiment  DRX087450DRX087451DRX087452DRX087453DRX087454DRX087455DRX087456DRX087457DRX087458DRX087459 More
distribution JSONJSON-LD
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status public
visibility unrestricted-access
dateCreated 2017-04-18T05:59:52+09:00
dateModified 2018-04-23T14:13:46+09:00
datePublished 2018-04-23T14:13:45+09:00