home > bioproject > PRJDB5708
identifier PRJDB5708
type bioproject
sameAs
organism marine metagenome
title Metagenomic sequences of the Ofunato Bay 2015
description The Ofunato Bay in Iwate Prefecture, Japan, is a deep coastal bay located at the center of the Sanriku Rias coast and considered an economically and environmentally important asset. Here we present the first whole genome sequencing (WGS) study on the microbial communities of the Bay where surface water samples were collected in 2015 from three stations along its length to cover the entire bay. We sequenced 0.2-µm filter fraction, targeting the free-living fraction only, among the sequentially size-fractionated samples of 20.0-, 5.0-, 0.8- and 0.2-µm filters,. As expected, Proteobacteria (Alpha, Beta and Gamma) were the most abundant phyla in the Ofunato Bay followed by Bacteroidetes, Firmicutes, Actinobacteria, Cyanobacteria and Tenericutes. We detected a wide range of heterotrophic bacteria, Archaea and eukaryotic algae. The majority of these bacteria are considered significant in oceans and marine ecology.
data type Genome Sequencing
publication
29705129
properties 
{...}
dbXrefs
sra-run  DRR090871DRR090872DRR090873DRR232707DRR232708DRR232709DRR232710DRR232711DRR232712DRR232713 More
sra-submission  DRA005744
biosample  SAMD00078849SAMD00078850SAMD00078851SAMD00231437SAMD00231438SAMD00231439SAMD00231440SAMD00231441SAMD00231442SAMD00231443 More
sra-study  DRP004618
sra-sample  DRS080323DRS080324DRS080325DRS140086DRS140087DRS140088DRS140089DRS140090DRS140091DRS140092 More
sra-experiment  DRX084576DRX084577DRX084578DRX222929DRX222930DRX222931DRX222932DRX222933DRX222934DRX222935 More
distribution JSONJSON-LD
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status public
visibility unrestricted-access
dateCreated 2017-04-19T08:21:45+09:00
dateModified 2018-11-27T13:00:32+09:00
datePublished 2018-11-27T13:00:31+09:00