home > bioproject > PRJDB6262
identifier PRJDB6262
type bioproject
sameAs
organism riverine metagenome
title 16S rRNA next generation sequencing of bacterial community from Tama River
description In an effort to determine genus- or species-level taxonomic profiles and diversity of bacterial consortia in the Tama River around urban Tokyo, next generation sequencing (NGS) technology targeting 16S rRNA gene amplicon was employed. Metagenomic analysis was performed by Ion PGM and MiSeq after sequentially filtering samples through 5, 0.8 and 0.2 µm.
data type Metagenome Targeted Locus (Loci)
publication
properties 
{...}
dbXrefs
sra-run  DRR100390DRR100391DRR100392DRR100393DRR100394DRR100395
sra-submission  DRA006086
biosample  SAMD00092849SAMD00092850SAMD00092851SAMD00092852SAMD00092853SAMD00092854
sra-study  DRP005390
sra-sample  DRS106367DRS106368DRS106369DRS106370DRS106371DRS106372
sra-experiment  DRX093823DRX093824DRX093825DRX093826DRX093827DRX093828
distribution JSONJSON-LD
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status public
visibility unrestricted-access
dateCreated 2017-08-22T04:28:59+09:00
dateModified 2019-08-22T13:01:09+09:00
datePublished 2019-08-22T13:01:08+09:00