home > bioproject > PRJDB6517
identifier PRJDB6517
type bioproject
sameAs
organism Mus musculus
title Gene expression profiles in control and Hdac3-KD PGCLCs
description In mice, primordial germ cells (PGCs), which are the precursors of gametes, are fate-determined from pluripotent epiblasts. The epigenetic regulation of PGC fate determination remains poorly understood. We identify histone deacetylase 3 (HDAC3) as an epigenetic regulator of PGC fate determination by an RNA interference screen for histone modifier genes involved in PGC-like cell (PGCLC) induction in culture. To comprehensively investigate changes in gene expression following Hdac3-KD during PGCLC induction, we carried out RNA sequencing (RNA-seq) analysis to compare the transcriptome of the Hdac3-KD cells with that of the control KD cells 2 days after induction of PGCLCs.
data type Transcriptome or Gene Expression
publication
properties 
{...}
dbXrefs
sra-run  DRR121997DRR121998DRR121999DRR122000
sra-submission  DRA006497
biosample  SAMD00106229SAMD00106230SAMD00106231SAMD00106232
sra-study  DRP004425
sra-sample  DRS074792DRS074793DRS074794DRS074795
sra-experiment  DRX114933DRX114934DRX114935DRX114936
distribution JSONJSON-LD
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status public
visibility unrestricted-access
dateCreated 2017-11-18T06:11:51+09:00
dateModified 2018-08-24T13:03:15+09:00
datePublished 2018-08-24T13:03:15+09:00