home > bioproject > PRJDB6731
identifier PRJDB6731
type bioproject
sameAs
organism soil metagenome
title amoA genes repond to long-term fertilization
description AOA and AOB amoA genes were determined to examiend effect of long-term fertilization on AOA and AOB community structure in an acidic Ultisol. The field experiment ran for 27 years and comprised seven treatments: no fertilization (control); inorganic NPK fertilizer (N); inorganic NPK fertilizer + lime (CaCO3) (NL); inorganic NPK fertilizer + peanut straw (NPS); inorganic NPK fertilizer + rice straw (NRS); inorganic NPK fertilizer + radish (NR); and inorganic NPK fertilizer + pig manure (NPM). The main objective of this study was to examine the effects of long-term fertilization on nitrification and associated functional microbial groups (AOA and AOB amoA) in an acidic Ultisol. To achieve this, soil samples from a long-term field experiment was collected and analyzed using quantitative PCR and high-throughput sequencing. We hypothesized that long-term fertilization would exert significant influence on nitrification activity and abundance and community structure of AOA and AOB
data type Genome Sequencing
publication
properties 
{...}
dbXrefs
sra-run  DRR123258DRR123259DRR123260DRR123261DRR123262DRR123263DRR123264DRR123265DRR123266DRR123267 More
sra-submission  DRA006528DRA006529
biosample  SAMD00112141SAMD00112142SAMD00112143SAMD00112144SAMD00112145SAMD00112146SAMD00112147SAMD00112148SAMD00112149SAMD00112150 More
sra-study  DRP004337
sra-sample  DRS071584DRS071585DRS071586DRS071587DRS071588DRS071589DRS071590DRS071454DRS071455DRS071456 More
sra-experiment  DRX116111DRX116112DRX116113DRX116114DRX116115DRX116116DRX116117DRX116118DRX116119DRX116120 More
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status public
visibility unrestricted-access
dateCreated 2018-02-01T09:00:41+09:00
dateModified 2018-07-22T13:05:40+09:00
datePublished 2018-07-22T13:05:40+09:00