home > bioproject > PRJDB7239
identifier PRJDB7239
type bioproject
sameAs
organism Aegilops
title Origin of the wheat B-genome chromosomes conferred by RNA-seq analysis of leaf transcripts in the section Sitopsis species of Aegilops
description Common wheat (Triticum aestivum L., genome constitution AABBDD), one of the major crops, is an allohexaploid species, derived from allopolyploid speciation through interspecific crossing between cultivated tetraploid wheat Triticum turgidum L. (AABB) and its diploid relative Aegilops tauschii Coss. (DD). However, the B genome origin has been still under discussion despite of extensive efforts during the past few decades. To clarify the origin of the wheat B-genome chromosomes, RNA sequencing of leaf transcripts in the section Sitopsis species of Aegilops was performed. We estimated phylogenetic relationship of Sitopsis species and genetic divergence between them based on single nucleotide polymorphisms derived from RNA sequencing data.
data type Transcriptome or Gene Expression
publication
30486239
30715317
properties 
{...}
dbXrefs
sra-run  DRR144841DRR144842DRR144843DRR144844DRR144845DRR144846DRR144847DRR144848DRR144849DRR144850 More
sra-submission  DRA007097
biosample  SAMD00131840SAMD00131821SAMD00131822SAMD00131823SAMD00131824SAMD00131825SAMD00131826SAMD00131827SAMD00131828SAMD00131829 More
sra-study  DRP005006
sra-sample  DRS093298DRS093279DRS093280DRS093281DRS093282DRS093283DRS093284DRS093285DRS093286DRS093287 More
sra-experiment  DRX135997DRX135998DRX135999DRX136000DRX136001DRX136002DRX136003DRX136004DRX136005DRX136006 More
distribution JSONJSON-LD
Download
ddbj_core_bioproject.xml  HTTPS FTP
status public
visibility unrestricted-access
dateCreated 2018-07-21T07:43:17+09:00
dateModified 2019-04-26T13:10:33+09:00
datePublished 2019-04-26T13:10:33+09:00