home > bioproject > PRJDB7247
identifier PRJDB7247
type bioproject
sameAs
organism sludge metagenome
title Eukaryotic community structures in anaerobic granular sludge based on 18S rRNA gene sequencing
description Eukaryotes are important components of ecosystems in wastewater treatment processes. Although eukaryotic communities are well characterized in aerobic wastewater treatment processes, little is known in anaerobic treatment systems. In this study, eukaryotic community in the upflow anaerobic sludge blanket (UASB) reactor treating domestic sewage were investigated by V4 and V9 region of 18S rRNA gene amplicon sequencing. Sludge samples were collected from the UASB reactor during 2 years of operational period, activated sludge, and influent sewage, and analyzed and compared to characterize anaerobic eukaryotes. For the UASB reactor, V4 amplicon libraries were more specifically detected eukaryotic sequences than that of V9 amplicon library. The V9 amplicon library could detect different taxonomic group from V4 amplicon libraries, suggesting that commonly used V4 and V9 primer pairs produce a bias for eukaryotic community in the UASB reactor. Eukaryotic community structures in the UASB reactor were influenced by immigration of eukaryotic via influent sewage, but clearly different from influent sewage and activated sludge. The multivariate statistics indicated that some protist genus correlated with chemical oxygen demand and suspended solid concentration, suggested that they could be used as bioindicator of treatment performance in the UASB reactor. In addition, uncultured eukaryotes such as members of phylum Icthyosporea and Perkinsozoa in protist and LKM11 and LKM15 group in fungi were dominant in the UASB reactor.
data type Metagenome
publication
10.1038/s41598-019-49290-y
properties 
{...}
dbXrefs
sra-run  DRR147095DRR147096DRR147097DRR147098DRR147099DRR147100DRR147101DRR147102DRR147103DRR147104 More
sra-submission  DRA007151
biosample  SAMD00133791SAMD00133792SAMD00133793SAMD00133794SAMD00133795SAMD00133796SAMD00133797SAMD00133798SAMD00133799SAMD00133800 More
sra-study  DRP005489
sra-sample  DRS108494DRS108495DRS108496DRS108497DRS108498DRS108499DRS108500DRS108501DRS108502DRS108503 More
sra-experiment  DRX137887DRX137888DRX137889DRX137890DRX137891DRX137892DRX137893DRX137894DRX137895DRX137896 More
distribution JSONJSON-LD
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status public
visibility unrestricted-access
dateCreated 2018-07-23T16:27:52+09:00
dateModified 2019-10-03T13:01:42+09:00
datePublished 2019-10-03T13:01:42+09:00