home > bioproject > PRJDB7260
identifier PRJDB7260
type bioproject
sameAs
organism Saccharomyces cerevisiae
title Genome-wide identification of genes targeted by RBP1
description In eukaryotic cells, ribosome production requires the activity of all three RNA polymerases along with enormous amounts of energy and resources. Therefore, it is strictly and coordinately regulated in response to certain environmental conditions. Fpr1 forms a complex with rapamycin, an immunosuppressive agent, and this binary complex inhibits TORC1, a central player of coordinated production of ribosomes. Despite the crucial role of Fpr1 in drug efficacy, its involvement in ribosomal biogenesis under physiological conditions remains unclear. Previous studies revealed that mutation of FPR1 causes synthetic lethality with mutation of HMO1, a well-known transcriptional regulator of ribosomal component genes. Our recent study revealed that deletion of HMO1 and FPR1 decreased transcription of RPL25, which encodes one of essential ribosomal proteins (RPs), thereby causing such a synthetic growth defect. Here, we found that Fpr1 specifically binds to promoters of RPGs including RPL25 in a Rap1-dependent manner, further promoting Fhl1/Ifh1-binding to some specific RPG promoters. Based on these results, we concluded that Fpr1 is a transcriptional regulator of RPGs.
data type Epigenomics
publication
properties 
{...}
dbXrefs
sra-run  DRR146871DRR146872DRR189740DRR189741DRR189742DRR189743DRR189744DRR189745DRR189746DRR189747 More
sra-submission  DRA007139DRA008879
biosample  SAMD00133822SAMD00133803SAMD00181017SAMD00181018SAMD00181019SAMD00181020SAMD00181021SAMD00181022SAMD00181023SAMD00181024 More
sra-study  DRP005888
sra-sample  DRS125571DRS125570DRS125670DRS125671DRS125672DRS125673DRS125674DRS125675DRS125676DRS125677 More
sra-experiment  DRX137663DRX137664DRX180205DRX180206DRX180207DRX180208DRX180209DRX180210DRX180211DRX180212 More
distribution JSONJSON-LD
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status public
visibility unrestricted-access
dateCreated 2018-07-26T07:42:28+09:00
dateModified 2020-03-04T13:02:32+09:00
datePublished 2020-03-04T13:02:32+09:00