home > bioproject > PRJDB7405
identifier PRJDB7405
type bioproject
sameAs
organism Toxoplasma
title Genome sequencing project of T. gondii, strain TgCatJpOk4
description To understand the genomic composition of T. gondii in Japan, we are sequencing the genome of Japanese isolates in our genomic sequencing project of T. gondii. As part of the project, we sequenced the Japanese isolate, TgCatJpOk4 isolated from wild cat in Okinawa prefecture, showing high virulence in mouse models but the phenotypes associated with the virulence (growth rate, invasion ability) is similar to low virulence laboratory strain in our study. To reveal the molcular mechanism of this phenomenon and decide the phylogenetic position of TgCatJpOk4 accurately, we sequenced the whole genome of TgCatJpOk4 by using Illumina HiSeq 2000 sequencer.
data type Genome Sequencing Variation
publication
properties 
{...}
dbXrefs
sra-run  DRR149984
sra-submission  DRA007306
biosample  SAMD00137417
sra-study  DRP004460
sra-sample  DRS075325
sra-experiment  DRX140735
distribution JSONJSON-LD
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status public
visibility unrestricted-access
dateCreated 2018-09-06T18:14:53+09:00
dateModified 2018-09-07T02:24:22+09:00
datePublished 2018-09-07T02:24:22+09:00