home > bioproject > PRJDB7926
identifier PRJDB7926
type bioproject
sameAs
organism Homo sapiens
title Nanopore long-read sequencing reveals a novel class of structural aberrations in lung cancer genomes
description To identify and characterize a novel class of local structural aberrations in human lung adenocarcinoma genomes, we performed whole-genome sequencing of lung cancer cell lines using nanopore-type long-read sequencers, MinION and PromethION. We generated whole-genome sequencing data of five cell lines. We subjected the long-read equencing data to our bioinformatics pipeline and analyzed point mutations, large deletions, chromosomal rearrangements and the novel types of structural alterations in cancer genomes.
data type Genome Sequencing
publication
properties 
{...}
dbXrefs
sra-run  DRR165687DRR165688DRR165689DRR165690DRR165691DRR165692DRR165693DRR165694DRR171381DRR171382 More
sra-submission  DRA007941DRA008154DRA008295DRA009428DRA009429
biosample  SAMD00157572SAMD00157573SAMD00157574SAMD00157575SAMD00164031SAMD00164032SAMD00164033SAMD00164034SAMD00164035SAMD00164036 More
sra-study  DRP005565
sra-sample  DRS112977DRS112978DRS112979DRS112980DRS138506DRS138507DRS138508DRS138509DRS138510DRS138511 More
sra-experiment  DRX156303DRX156304DRX156305DRX156306DRX156307DRX156308DRX156309DRX156310DRX161993DRX161994 More
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status public
visibility unrestricted-access
dateCreated 2019-01-18T09:22:51+09:00
dateModified 2019-11-07T13:02:45+09:00
datePublished 2019-11-07T13:02:45+09:00