home > bioproject > PRJDB8164
identifier PRJDB8164
type bioproject
sameAs
organism Mus
title Gene expression profile of thioglycollate-elicited peritoneal macrophages (TEMPs) in WT and HIF-1a KO mices under hypoxic condition.
description The purpose of this study is to identify the hypoxia-stimulated secretion factors in mouse macrophages. Thioglycollate-elicited peritoneal macrophages (TEMPs) were collected from the peritoneal cavity 4 days after the intraperitoneal injection of 3% thioglycollate solution in hematopoietic/endothelial-specific HIF-1a Knock outmice or cre negative littermate controls. TEPMs were exposed to hypoxia (1% O2) or normoxia and collected total RNA at 0h, 4h and 12h time points. Total RNA was isolated using RNeasy kit (QIAGEN) and RNA sequencing perfomed on illumina Genome Analyzer IIx (GAIIx) platform for analysis of differentially expressed transcriptome in hematopoietic/endothelial-specific HIF-1a Knock out mice or cre negative littermate control.
data type Transcriptome or Gene Expression
publication
properties 
{...}
dbXrefs
sra-run  DRR173349DRR173350DRR173351DRR173352DRR173353DRR173354
sra-submission  DRA008230
biosample  SAMD00166424SAMD00166425SAMD00166426SAMD00166427SAMD00166428SAMD00166429
sra-study  DRP005103
sra-sample  DRS096123DRS096124DRS096125DRS096126DRS096127DRS096128
sra-experiment  DRX163960DRX163961DRX163962DRX163963DRX163964DRX163965
distribution JSONJSON-LD
Download
ddbj_core_bioproject.xml  HTTPS FTP
status public
visibility unrestricted-access
dateCreated 2019-04-04T04:27:29+09:00
dateModified 2019-05-25T13:06:59+09:00
datePublished 2019-05-25T13:06:59+09:00