home > bioproject > PRJDB8183
identifier PRJDB8183
type bioproject
sameAs
organism fermentation metagenome
title Microbiota involved in fermented traditional Japanese indigo
description In Japan, indigo-dyeing has traditionally been performed by natural fermentation. The indigo remains in a reduced state for 6 months, on average, although the fermentation fluid has a greater chance of being contaminated in an open environment, especially during the dyeing process. This fermentation system has several advantages for investigations on certain aspects of microbial ecology such as the functions of individual microorganisms and interactions between individual microorganisms. To understand the mechanisms underlying the changes in the fermentation phase that are concomitant with the indigo reduction, we made 2 batches of indigo fermentation fluid. The bacterial V4 region of 16S rRNA genes were PCR amplified for next-generation sequencing.
data type Genome Sequencing
publication
properties 
{...}
dbXrefs
sra-run  DRR174974DRR174975DRR174976DRR174977
sra-submission  DRA008271
biosample  SAMD00166903SAMD00166904SAMD00166912SAMD00166917
sra-study  DRP005012
sra-sample  DRS093326DRS093327DRS093328DRS093329
sra-experiment  DRX165542DRX165543DRX165544DRX165545
distribution JSONJSON-LD
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status public
visibility unrestricted-access
dateCreated 2019-04-08T08:30:12+09:00
dateModified 2019-04-26T13:02:16+09:00
datePublished 2019-04-26T13:02:16+09:00