home > bioproject > PRJDB8254
identifier PRJDB8254
type bioproject
sameAs
organism Oryza sativa
title Deciphering the binding sites of rice transcription factors involved in defence response
description To understand regulation mechanisms for defence response in rice against pathogens, we focus on two tanscripiton factors (a bZIP-type factore OsTGAP1 and a bHLH-type factor OsMYC2), which have been known to be involved in the transcriptional reguation of defensive terpenoids synthesis in rice.In this study, genome-wide binding sites of these factors on the rice chromosome are surveyed by ChiP-seq approach.Based on the results, possible target genes that are direclty controled by these factors at transcruption level will be found, and signaing pathways from patogen attack to antimictobial compound production in rice will be proposed.
data type Epigenomics
publication
properties 
{...}
dbXrefs
sra-run  DRR177332DRR177333DRR177334DRR177335DRR177336DRR177337DRR177338DRR177339DRR177340DRR177341
sra-submission  DRA008326
biosample  SAMD00169835SAMD00169836SAMD00169837SAMD00169838SAMD00169839SAMD00169840SAMD00169841SAMD00169842SAMD00169843SAMD00169844
sra-study  DRP007210
sra-sample  DRS180847DRS180848DRS180849DRS180850DRS180851DRS180852DRS180853DRS180854DRS180855DRS180856
sra-experiment  DRX167896DRX167897DRX167898DRX167899DRX167900DRX167901DRX167902DRX167903DRX167904DRX167905
distribution JSONJSON-LD
Download
ddbj_core_bioproject.xml  HTTPS FTP
status public
visibility unrestricted-access
dateCreated 2019-04-25T07:32:11+09:00
dateModified 2021-04-25T13:12:59+09:00
datePublished 2021-04-25T13:12:59+09:00