home > bioproject > PRJDB8330
identifier PRJDB8330
type bioproject
sameAs
organism Mus musculus
title The identification of glucose-responsive genes in the liver of WT and ob/ob mice.
description The ability to produce stable blood glucose is indispensable for human life and health. The mechanisms regulating glucose-responsive metabolism in the liver and how these mechanisms are altered in obesity have yet to be identified. Here we measured transcriptomic data in the liver of wild type (WT) and leptin-deficient obese (ob/ob) mice following oral glucose administration, and identified the genes that were quantitatively changed by oral glucose administration. After overnight fasting (16 h), ten-week-old male C57BL/6 wild-type and ob/ob mice were administered 2 g/kg body weight of glucose orally. At 0, 20, 60, 120, 240 min after administration, mice were sacrificed by cervical dislocation and the liver was dissected and immediately frozen in liquid nitrogen. The frozen liver was pulverized with dry ice to a fine powder with a blender and separated into tubes. Total RNA was extracted from the liver using RNeasy Mini Kit (QIAGEN) and QIAshredder (QIAGEN) and assessed for quantity using Nanodrop (Thermo Fisher Scientific) and for quality using the 2100 Bioanalyzer (Agilent Technologies). cDNA libraries were prepared using SureSelect strand-specific RNA library preparation kit (Agilent Technologies). The resulting cDNAs were subjected to 100-bp paired-end sequencing on an Illumina HiSeq2500 Platform (Illumina).
data type Transcriptome or Gene Expression
publication
properties 
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dbXrefs
sra-run  DRR179019DRR179020DRR179021DRR179022DRR179023DRR179024DRR179025DRR179026DRR179027DRR179028 More
sra-submission  DRA008416DRA010714DRA012292
biosample  SAMD00172020SAMD00172021SAMD00172022SAMD00172023SAMD00172024SAMD00172025SAMD00172026SAMD00172027SAMD00172028SAMD00172029 More
sra-study  DRP005130
sra-sample  DRS097794DRS097795DRS097796DRS097797DRS097798DRS097799DRS097800DRS097801DRS097802DRS097803 More
sra-experiment  DRX169545DRX169546DRX169547DRX169548DRX169549DRX169550DRX169551DRX169552DRX169553DRX169554 More
distribution JSONJSON-LD
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status public
visibility unrestricted-access
dateCreated 2019-05-17T05:06:49+09:00
dateModified 2019-06-04T13:15:59+09:00
datePublished 2019-06-04T13:15:59+09:00