home > bioproject > PRJDB8338
identifier PRJDB8338
type bioproject
sameAs
organism mouse gut metagenome
title Effects of FujiFF on microbiota profiling in the feces of the mice fed a high fat-high sucrose diet
description Four weeks old Male C57BL/6 mice were fed a cellulose- or FujiFF-containing high fat-high sucrose diet for 12 weeks. Fecal droppings were collected at the end of treatment. Fecal DNA was extracted from frozen samples using the FastDNA SPIN Kit for Feces (MP Biomedicals, Santa Ana, CA) per the manufacture's instructions. The V4 region of the 16S rRNA gene was amplified using dual-indexed 515F/806R primers. The amplicons were sequenced using an Illumina MiSeq with a MiSeq Reagent 222 kit V3 (Illumina, USA). The libraries were prepared following the Illumina protocol for 10pM: 'Preparing Libraries for Sequencing on the MiSeq' (part 15039740, Rev. D).
data type Metagenome
publication
properties 
{...}
dbXrefs
sra-run  DRR180605DRR180606DRR180607DRR180608DRR180609DRR180610DRR180611DRR180612DRR180613DRR180614 More
sra-submission  DRA008499
biosample  SAMD00172922SAMD00172923SAMD00172924SAMD00172925SAMD00172926SAMD00172927SAMD00172928SAMD00172929SAMD00172930SAMD00172931 More
sra-study  DRP005363
sra-sample  DRS105696DRS105697DRS105698DRS105699DRS105700DRS105701DRS105702DRS105703DRS105704DRS105705 More
sra-experiment  DRX171121DRX171122DRX171123DRX171124DRX171125DRX171126DRX171127DRX171128DRX171129DRX171130 More
distribution JSONJSON-LD
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status public
visibility unrestricted-access
dateCreated 2019-05-16T08:02:31+09:00
dateModified 2019-11-15T11:44:53+09:00
datePublished 2019-08-14T13:08:48+09:00