home > bioproject > PRJDB8497
identifier PRJDB8497
type bioproject
sameAs
organism mouse gut metagenome
title SCFAs supplementation exerts metabolic benefits
description The 7-week-old C57BL/6J mice were fed on a HFD diet or HFD containing 5% cellulose, acetate, propionate, butyrate for 4 weeks in a factorial design. Feces were collected at after treatments. Fecal DNA was extracted from frozen samples using the FastDNA SPIN Kit for Feces by following the manufacturer's instructions. Partial 16S rRNA gene sequences were amplified targeting the hypervariable regions V4 using 515F/806R primers. The amplicons were sequenced using an Illumina MiSeq with MiSeq Reagent 222 kit V3. The libraries were prepared following the Illumina protocol for 8pM: 'Preparing Libraries for Sequencing on the MiSeq'.
data type Metagenome
publication
properties 
{...}
dbXrefs
sra-run  DRR183284DRR183285DRR183286DRR183287DRR183288DRR183289DRR183290DRR183291DRR183292DRR183293 More
sra-submission  DRA008619
biosample  SAMD00177718SAMD00177719SAMD00177720SAMD00177721SAMD00177722SAMD00177723SAMD00177724SAMD00177725SAMD00177726SAMD00177727 More
sra-study  DRP005436
sra-sample  DRS107531DRS107532DRS107533DRS107534DRS107535DRS107536DRS107537DRS107538DRS107539DRS107540 More
sra-experiment  DRX173765DRX173766DRX173767DRX173768DRX173769DRX173770DRX173771DRX173772DRX173773DRX173774 More
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status public
visibility unrestricted-access
dateCreated 2019-06-24T12:57:49+09:00
dateModified 2019-09-10T14:24:13+09:00
datePublished 2019-09-10T14:24:13+09:00