home > bioproject > PRJDB9467
identifier PRJDB9467
type bioproject
sameAs
organism Homo sapiens
title AID2 technology gives superior degradation control
description Protein knockdown by the auxin-inducible degron (AID) technology is useful to study protein function in living cells owing to its rapid depletion, that makes possible to observe an immediate phenotype. However, the current AID system has two major drawbacks; leaky degradation and use of a high dose of auxin. These negative features make difficult to precisely control the expression level of a protein of interest in living cells and to apply this method to mice. Here, we overcame these problems by taking an advantage of a bump-and-hole approach and established AID version 2 (AID2) systems. AID2 employing an OsTIR1(F74G) mutant and a new ligand, 5-Ph-IAA, show significantly low leaky degradation, requires a 670-fold less ligand concentration, and achieves even quicker degradation. We demonstrate that successful generation of human cell mutants for genes that were previously difficult to deal with, and that AID2 works not only in yeast and mammalian cells, but even in mice to achieve rapid target depletion.
data type Transcriptome or Gene Expression
publication
properties 
{...}
dbXrefs
sra-run  DRR216648DRR216649DRR216650DRR216651DRR240741DRR240742DRR240743DRR240744
sra-submission  DRA009832DRA010661
biosample  SAMD00210807SAMD00210808SAMD00210809SAMD00210810SAMD00239188SAMD00239189SAMD00239190SAMD00239191
sra-study  DRP006607
sra-sample  DRS159109DRS159110DRS159111DRS159112DRS159156DRS159157DRS159158DRS159159
sra-experiment  DRX206983DRX206984DRX206985DRX206986DRX230600DRX230601DRX230602DRX230603
distribution JSONJSON-LD
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status public
visibility unrestricted-access
dateCreated 2020-03-11T04:36:17+09:00
dateModified 2020-10-10T21:46:47+09:00
datePublished 2020-10-10T21:46:47+09:00