home > bioproject > PRJEB11268
identifier PRJEB11268
type bioproject
sameAs
organism
title Illumina sequencing of 3.5 kb jumping libraries on 1000 Genomes Trios for SV discovery
description Illumina sequencing of 3.5 kb jumping libraries on 1000 Genomes Trios for SV discovery. Libraries were generated following the protocol described by Hanscom and Talkowski (2014). (http://www.ncbi.nlm.nih.gov/pubmed/24789519). Targeted fragment size was 3.5 kb, targeted genome coverage was >100X, and EcoP15I restriction fragment digestion of circularized DNA results in paired-end 25 bp reads that should be reverse complemented before alignment.
data type Other
organization
publication
Design of large-insert jumping libraries for structural variant detection using Illumina sequencing.
properties 
{...}
dbXrefs
sra-run  ERR1044113ERR1044114ERR1044115ERR1044116ERR1044117ERR1044118ERR1044119ERR1044120ERR1044121
sra-submission  ERA520623
biosample  SAMN00001694SAMN00001695SAMN00001696SAMN00006465SAMN00006466SAMN00006467SAMN00006579SAMN00006580SAMN00006581
sra-study  ERP012630
sra-sample  SRS000212SRS000213SRS000214SRS008631SRS008632SRS008633SRS008745SRS008746SRS008747
sra-experiment  ERX1124404ERX1124405ERX1124406ERX1124407ERX1124408ERX1124409ERX1124410ERX1124411ERX1124412
distribution JSONJSON-LD
Download
bioproject.xml  HTTPS FTP
status public
visibility unrestricted-access
dateCreated 2015-10-05T00:00:00Z
dateModified 2015-10-05T00:00:00Z
datePublished 2015-10-05T00:00:00Z