home > bioproject > PRJEB11418
identifier PRJEB11418
type bioproject
sameAs
organism
title HIC data for 1kg trios Hi-C data was generated for the thousand genomes project SV group by the laboratory of Bing Ren. under an embargo and cannot be used in independent publications until February 1, 2017. Please direct correspondence to the UCSD PIs Bing Ren (biren@ucsd.edu) and Jonathan Sebat (jsebat@ucsd.edu).
description HIC sequencing data has been generated for 1KG trios and the reads are mapped to grch38. Interaction matrices are calculated for each chromosome which lets us view the chromatin interactions inside the organisms.Hi-C data was generated for the thousand genomes project SV group by the laboratory of Bing Ren. under an embargo and cannot be used in independent publications until February 1, 2017. Please direct correspondence to the UCSD PIs Bing Ren (biren@ucsd.edu) and Jonathan Sebat
data type Other
organization
publication
properties 
{...}
dbXrefs
sra-run  ERR1157288ERR1157289ERR1157290ERR1160886ERR1162964ERR1162966ERR1162967ERR1162968ERR1162969ERR1162979 More
sra-submission  ERA540985ERA540986ERA540987ERA541421ERA541784ERA541978ERA541980ERA541981ERA541983ERA541985 More
biosample  SAMN00006465SAMN00006466SAMN00006467SAMN00006579SAMN00006580SAMN00006581SAMN00001694SAMN00001695SAMN00001696
sra-study  ERP012802
sra-sample  SRS008631SRS008632SRS008633SRS008745SRS008746SRS008747SRS000212SRS000213SRS000214
sra-experiment  ERX1230695ERX1230696ERX1230697ERX1234293ERX1236371ERX1236373ERX1236374ERX1236375ERX1236376ERX1236386 More
distribution JSONJSON-LD
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status public
visibility unrestricted-access
dateCreated 2015-11-25T00:00:00Z
dateModified 2015-11-25T00:00:00Z
datePublished 2015-11-25T00:00:00Z