home > bioproject > PRJEB11654
identifier PRJEB11654
type bioproject
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title RNAseq study (root and shoot) of Holcus lanatus ecotypes selected from two widely contrasting habitats, acid bog (pH 3.5) or limestone quarry spoil (pH 7.5)
description The aim of this study was to investigate ecotypic adaptation in Holcus lanatus in plants selected from two widely contrasting habitats, acid bog (pH 3.5) or limestone quarry spoil (pH 7.5), using a transcriptome based analysis approach including sequence analysis of root associated Glomeromycota. Differential gene expression in root and shoot of naturally occurring H. lanatus ecotypes, selected from either habitat and grown in a full factorial reciprocal soil transplant experiment were investigated and ecotype specific SNPs identified.
data type Other
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{...}
dbXrefs
sra-run  ERR1109882ERR1109883ERR1109884ERR1109885ERR1109886ERR1109887ERR1109888ERR1109889ERR1109890ERR1109891 More
sra-submission  ERA529046
biosample  SAMEA3644545SAMEA3644546SAMEA3644547SAMEA3644548SAMEA3644549SAMEA3644550SAMEA3644551SAMEA3644552SAMEA3644553SAMEA3644554 More
sra-study  ERP013055
sra-sample  ERS951694ERS951695ERS951696ERS951697ERS951698ERS951699ERS951700ERS951701ERS951702ERS951703 More
sra-experiment  ERX1189413ERX1189414ERX1189415ERX1189416ERX1189417ERX1189418ERX1189419ERX1189420ERX1189421ERX1189422 More
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status public
visibility unrestricted-access
dateCreated 2018-03-16T00:00:00Z
dateModified 2018-03-16T00:00:00Z
datePublished