| identifier | PRJEB11775 | ||||||||||||
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| type | bioproject | ||||||||||||
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| title | Acrocephalus schoenobaenus MHC class I ultra-deep sequencing genotyping | ||||||||||||
| description | Birds in the genus Acrocephalus have dozens of co-amplifying MHC class I genes and here we attempt to resolve complex genotypes in the sedge warbler (Acrocephalus schoenobaenus) using ultra-deep Illumina Mi-Seq sequencing. We sequenced exon 3 of MHC class I genes in 24 individuals in triplicate and used this data to test the effect of amplicon coverage (range: 500-20000 reads per amplicon) on the repeatability of genotyping using four different genotyping approaches. | ||||||||||||
| data type | Other | ||||||||||||
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| distribution | JSONJSON-LD | ||||||||||||
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| status | public | ||||||||||||
| visibility | unrestricted-access | ||||||||||||
| dateCreated | 2015-11-17T00:00:00Z | ||||||||||||
| dateModified | 2015-11-17T00:00:00Z | ||||||||||||
| datePublished | 2015-11-14T00:00:00Z |