home > bioproject > PRJEB11872
identifier PRJEB11872
type bioproject
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organism
title The aim was to explore the possible link between CH4 production and liquid/solid associated microbe.
description Methane (CH4) emission from ruminant livestock industry consist of 29% of total CH4 production in the world. The variation of different animal breeds in the production of CH4 may provide new opportunities for manipulating CH4 emissions. Six rumen-simulating fermenters (Rusitec) were set up for the study lasting for 16 d. The study diet contained forage to concentrate ratio of 50:50 with barley straw as the forage. Each three vessels received rumen fluid from yak and cattle, respectively. Microbial growth was measured using 15N as a marker. The microbe community structure from liquid and solid of each vessels were determined through 16S rRNA sequencing using MiSeq platform. Lower CH4 yield was found in yak compare with cattle (0.26 and 0.33 mmol CH4/g dry matter intake, respectively). The higher abundance of succinate- and lactate-producer genus Anaerobiospirillum, Streptococcus and Succinivibrio; propionate-producer genus Lactobacillus, hydrogen consumed genus included sulphate-reducing bacteria Desulfovibrio and acetogens Blautia were linked with lower CH4 production in yak. Bacteroides, Victivallis, Anaerosporobacter, Ruminococcus and Anaerovorax were correlated with cattle, which produce H2 as one of the main production. And the relative abundance of methanogen was higher in cattle. Thus, less H2 producer and CH4-producer; more H2 consumer existed in the rumen of yak contributed to the lower CH4 production.
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dbXrefs
sra-run  ERR1145706ERR1145707ERR1145708ERR1145709ERR1145710ERR1145711ERR1145712ERR1145713ERR1145714ERR1145715 More
sra-submission  ERA536207
biosample  SAMEA3673763SAMEA3673764SAMEA3673765SAMEA3673766SAMEA3673767SAMEA3673768SAMEA3673769SAMEA3673770SAMEA3673771SAMEA3673772 More
sra-study  ERP013291
sra-sample  ERS980912ERS980913ERS980914ERS980915ERS980916ERS980917ERS980918ERS980919ERS980920ERS980921 More
sra-experiment  ERX1224516ERX1224517ERX1224518ERX1224519ERX1224520ERX1224521ERX1224522ERX1224523ERX1224524ERX1224525 More
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status public
visibility unrestricted-access
dateCreated 2016-01-26T00:00:00Z
dateModified 2016-01-26T00:00:00Z
datePublished 2016-01-24T00:00:00Z