home > bioproject > PRJEB1213
identifier PRJEB1213
type bioproject
sameAs
organism
title Transcriptome Profiling of Ten Porcine Tissues at the Gene, Isoform and TSS level
description In this study we have employed RNA seq on ten different tissues including four brain tissues from two boars to gain a understanding of the differential variations in transcriptional profiles for these tissues consisting of occipital cortex, frontal cortex, hypothalamus and cerebellum along with such diverse tissues as heart, spleen, liver, kidney, lung and musculus longissimus dorsi. This has enabled us to perform comparative gene expression analysis of brain regions versus non-brain tissues along with inter-brain tissue comparisons. Hence, we have tested for differentially expressed genes and isoforms, differential splicing, transcription start sites (TSS), and differential promoter usage between all ten porcine tissues.
data type Transcriptome or Gene expression
organization
publication
properties 
{...}
dbXrefs
sra-run  ERR208926ERR208927ERR208928ERR208929ERR208930ERR208931ERR208932ERR208933ERR208934ERR208935 More
sra-submission  ERA178851
biosample  SAMEA2041643SAMEA1969400SAMEA2040584SAMEA2041071SAMEA2041069SAMEA2041558SAMEA1965831SAMEA2040926SAMEA2040777SAMEA2040857 More
sra-study  ERP002055
sra-sample  ERS198715ERS198738ERS198739ERS198680ERS198678ERS198710ERS198712ERS198667ERS198752ERS198662 More
sra-experiment  ERX183644ERX183667ERX183668ERX183609ERX183607ERX183639ERX183641ERX183596ERX183681ERX183591 More
distribution JSONJSON-LD
Download
bioproject.xml  HTTPS FTP
status public
visibility unrestricted-access
dateCreated 2013-07-23T00:00:00Z
dateModified 2013-07-23T00:00:00Z
datePublished 2012-12-14T00:00:00Z