home > bioproject > PRJEB12163
identifier PRJEB12163
type bioproject
sameAs
organism
title Eighteenth century Yersinia pestis genomes reveal the long-term persistence of an historical plague focus
description The 14th-18th century Yersinia pestis pandemic caused devastating epidemics in Europe for almost 400 years. The reasons for plague’s persistence and abrupt disappearance in Europe are poorly understood, but could have been due to either the presence of now-extinct plague foci in Europe itself, or successive disease introductions from other locations. Here we present five Y. pestis genomes from one of the last European outbreaks of plague, from 1722 Marseille, France. The lineage identified has not been found in any extant Y. pestis foci sampled to date, and has its ancestry in strains obtained from victims of the 14th century Black Death. These data suggest the existence of a previously uncharacterized historical plague focus within reach of Mediterranean port cities that persisted for at least three centuries. This disease source may have been responsible for the many resurgences of plague in Europe after the Black Death.
data type Other
organization
publication
Eighteenth century Yersinia pestis genomes reveal the long-term persistence of an historical plague focus.
properties 
{...}
dbXrefs
sra-run  ERR1193532ERR1193533ERR1193534ERR1193535ERR1193536ERR1193537ERR1193538ERR1193539ERR1193540ERR1193541
sra-submission  ERA547142ERA547143
biosample  SAMEA3713711SAMEA3713712SAMEA3713713SAMEA3713714SAMEA3713715
sra-study  ERP013605
sra-sample  ERS1020860ERS1020861ERS1020862ERS1020863ERS1020864
sra-experiment  ERX1266845ERX1266846ERX1266847ERX1266848ERX1266849ERX1266850ERX1266851ERX1266852ERX1266853ERX1266854
distribution JSONJSON-LD
Download
bioproject.xml  HTTPS FTP
status public
visibility unrestricted-access
dateCreated 2016-01-13T00:00:00Z
dateModified 2016-01-13T00:00:00Z
datePublished 2016-01-12T00:00:00Z