home > bioproject > PRJEB12304
identifier PRJEB12304
type bioproject
sameAs
organism
title Transcriptome analysis of PE-degrading Pseudomonas aeruginosa
description Four purified RNA extracts (2 from cells grown in glucose supplemented medium and another 2 from cells grown in PE supplemented medium) were subjected to sequencing. Following cDNA library preparations, the final sequencing libraries were quantified using the KAPA kit (KAPA Biosystem, USA) on a Stratagene Mx-3005P qPCR system (Agilent Technologies, USA) and the respective library sizes were confirmed using Agilent Bioanalyzer High Sensitivity DNA Chip (Agilent Technologies, USA). The resulting libraries were subjected to cluster generation and sequenced using an Illumina flow cell, 202 cycles (101 bp paired-end reads) on the Illumina HiSeq 2000 system (Illumina, USA).
data type Other
organization
publication
properties 
{...}
dbXrefs
sra-run  ERR1200358ERR1200359ERR1200360ERR1200361
sra-submission  ERA550450
biosample  SAMEA3721278SAMEA3721279SAMEA3721280SAMEA3721281
sra-study  ERP013765
sra-sample  ERS1028427ERS1028428ERS1028429ERS1028430
sra-experiment  ERX1272616ERX1272617ERX1272618ERX1272619
distribution JSONJSON-LD
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status public
visibility unrestricted-access
dateCreated 2017-12-20T00:00:00Z
dateModified 2017-12-20T00:00:00Z
datePublished