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identifier PRJEB12429
type bioproject
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title MiSeq 16S rRNA gene (archaeal 16S rRNA gene) sequences of 33 Mai Po sediments, including 18 samples from winter and 15 samples from summer
description DNA from 33 Mai Po sediments have been extracted and amplified by 21f/958r & Arch347F/Arch806R primer pairs (for archaeal 16S rRNA gene). The archaeal communities of these 33 samples were obtained.All samples were sequenced in a pair-end layout (PE 250bp or 300bp by MiSeq). Before submission, we have merged them into one read using FLASH-1.2.8. After merging, one individual read is about ~420bp. Sample ID to read file map:Sample ID Read fileMG1SumA ZZCAS1MG1SumB ZZCAS2MG1SumC ZZCAS3MG2SumA ZZCAS4MG2SumB ZZCAS5MG2SumC ZZCAS6MG3SumA ZZCAS7MG3SumB ZZCAS8MG3SumC ZZCAS9TF1SumA ZZCAS10TF1SumB ZZCAS11TF2SumA ZZCAS12TF2SumB ZZCAS13TF3SumA ZZCAS14TF3SumB ZZCAS15MG1WinA ZZCAW1MG1WinB ZZCAW2MG1WinC ZZCAW3MG1WinD ZZCAW4MG2WinA ZZCAW5MG2WinB ZZCAW6MG2WinC ZZCAW7MG2WinD ZZCAW8MG3WinA ZZCAW9MG3WinB ZZCAW10MG3WinC ZZCAW11MG3WinD ZZCAW12TF1WinA ZZCAW13TF1WinB ZZCAW14TF2WinA ZZCAW15TF2WinB ZZCAW16TF3WinA ZZCAW17TF3WinB ZZCAW18
data type Other
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publication
Stratified Bacterial and Archaeal Community in Mangrove and Intertidal Wetland Mudflats Revealed by High Throughput 16S rRNA Gene Sequencing.
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