home > bioproject > PRJEB12435
identifier PRJEB12435
type bioproject
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organism
title RNA-seq of synovial membranes from a preclinical model of post-traumatic knee osteoarthritis to evaluate the effects of corticosteroid treatment
description Yorkshire pigs received untreated unilateral ACL transection through a medial arthrotomy (INJ, n=6), transection with immediate injection of 20mg triamcinolone acetonide (TRI, n=6) or no surgery (CON, n=6). Synovial membranes were harvested two weeks after the injury in the lateral knee joint compartment. The whole biopsy was homogenised for RNA extraction. The objective of the experiment was to test if intraarticular corticosteroid injection mitigates injury-induced synovitis and collagen degradation after anterior cruciate ligament transection and to characterize the synovial response using the described perturbations in combination with a functional genomics approach.
data type Transcriptome or Gene expression
organization
publication
properties 
{...}
dbXrefs
sra-run  ERR1223303ERR1223304ERR1223305ERR1223306ERR1223307ERR1223308ERR1223309ERR1223310ERR1223311ERR1223312 More
sra-submission  ERA553596
biosample  SAMEA3727375SAMEA3727376SAMEA3727377SAMEA3727378SAMEA3727379SAMEA3727380SAMEA3727381SAMEA3727382SAMEA3727383SAMEA3727384 More
sra-study  ERP013913
sra-sample  ERS1034524ERS1034525ERS1034526ERS1034527ERS1034528ERS1034529ERS1034530ERS1034531ERS1034532ERS1034533 More
sra-experiment  ERX1295516ERX1295517ERX1295518ERX1295519ERX1295520ERX1295521ERX1295522ERX1295523ERX1295524ERX1295525 More
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status public
visibility unrestricted-access
dateCreated 2016-02-02T00:00:00Z
dateModified 2016-02-02T00:00:00Z
datePublished 2016-01-29T00:00:00Z