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identifier PRJEB12575
type bioproject
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organism
title Expression Homeostasis during DNA Replication [DNA/ChIP-seq data alpha-factor]
description Genome replication introduces a step-wise increase in the DNA template available for transcription. Genes replicated early in S-phase experience this increase before late-replicating genes, raising the question of how expression levels are affected by DNA replication. We show that in budding yeast, mRNA synthesis rate is buffered against changes in gene dosage during S-phase. This expression homeostasis depends on acetylation of H3 on its internal K56 site by Rtt109/Asf1. Deleting these factors, mutating H3K56 or upregulating its deacetylation, increases gene expression in S-phase in proportion to gene replication timing. Therefore, H3K56 acetylation on newly deposited histones reduces transcription efficiency from replicated DNA, complementing its role in guarding genome stability. Our study provides the first molecular insight into the mechanism maintaining expression homeostasis during DNA replication.
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dbXrefs
sra-run  ERR1231585ERR1231586ERR1231587ERR1231588ERR1231589ERR1231590ERR1231591ERR1231592ERR1231593ERR1231594 More
sra-submission  ERA559213ERA559215
biosample  SAMEA3860169SAMEA3860170SAMEA3860171SAMEA3860172SAMEA3860173SAMEA3860174SAMEA3860175SAMEA3860176SAMEA3860177SAMEA3860178 More
sra-study  ERP014063
sra-sample  ERS1047303ERS1047304ERS1047305ERS1047306ERS1047307ERS1047308ERS1047309ERS1047310ERS1047311ERS1047312 More
sra-experiment  ERX1303524ERX1303525ERX1303526ERX1303527ERX1303528ERX1303529ERX1303530ERX1303531ERX1303532ERX1303533 More
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status public
visibility unrestricted-access
dateCreated 2016-02-09T00:00:00Z
dateModified 2016-02-09T00:00:00Z
datePublished 2016-02-09T00:00:00Z