home > bioproject > PRJEB12640
identifier PRJEB12640
type bioproject
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title A study on rhizosphere bacterial community succession along a glacier chronosequence
description Rhizosphere is a hotspot of microbial diversity and abundance and the “rhizosphere effect” is known to rule plant-microbe facilitative interactions. Little is known about the role of soil developmental stage in shaping rhizosphere microbiome in deglaciated moraine. We studied a soil chronosequence in the forefront of a receding glacier (Midtre Lovénbreen, Svalbard Island) encompassing 7 sites differentially exposed to primary succession, not isolated by distance but by the age of ecosystem evolution. Focusing on the rhizosphere of the ubiquitous plant Saxifraga oppositifolia, we assessed the diversity of bacterial communities subjected to different environmental factors across the chronosequence. By applying high-throughput sequencing, Phylochip and DNA-based fingerprinting we demonstrated that soil development was the factor shaping bacterial community in the earlier successional stage, while the rhizosphere effect was significant in soils released by the glacier since more than 20 years. Rhizosphere bacterial communities were highly similar after 20 and 100 years of soil development, differentiating at the older successional stages in the mature tundra ecosystem. We demonstrated the presence of bacterial distribution patterns influenced, besides the interaction with the plant, by environmental factors related to pedogenesis and ecosystem evolution stage.
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dbXrefs
sra-run  ERR1248779ERR1248780ERR1248781ERR1248782ERR1248783ERR1248784ERR1248785ERR1248786ERR1248787ERR1248788 More
sra-submission  ERA560886ERA879220
biosample  SAMEA3864999SAMEA3865000SAMEA3865001SAMEA3865002SAMEA3865003SAMEA3865004SAMEA3865005SAMEA3865006SAMEA3865007SAMEA3865008 More
sra-study  ERP014136
sra-sample  ERS1052133ERS1052134ERS1052135ERS1052136ERS1052137ERS1052138ERS1052139ERS1052140ERS1052141ERS1052142 More
sra-experiment  ERX1320717ERX1320718ERX1320719ERX1320720ERX1320721ERX1320722ERX1320723ERX1320724ERX1320725ERX1320726 More
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status public
visibility unrestricted-access
dateCreated 2017-04-03T00:00:00Z
dateModified 2017-04-03T00:00:00Z
datePublished