home > bioproject > PRJEB13579
identifier PRJEB13579
type bioproject
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title Transcriptome analyses of chronic traumatic encephalopathy show alterations in protein phosphatase expression associated with tauopathy
description Chronic traumatic encephalopathy (CTE) is a progressive neurodegenerative disorderassociated with repetitive head injury (RHI) with distinctive neuropathological features that differentiate it from other neurodegenerative diseases. Intraneuronal tau aggregates, albeit in different patterns, are diagnostic neuropathological features of CTE but the exact mechanism of tauopathy is not known in CTE. We performed whole RNA sequencing analysis of postmortem brain tissue from patients with CTE and compared the results to normal controls to determine the transcriptome signature changes associated with CTE. We found that genes related to MAP Kinase and calcium signaling pathways were significantly down regulated in CTE. Altered expression of protein phosphatases (PP) in these networks further suggest thatthe tauopathy found in CTE shares common pathological mechanisms as similar toAlzheimer’s disease (AD). Using cell lines and animal models we also showed that reduced PPP3CA/PP2B phosphatase activity is directly linked to increases in phosphorylated (p)-tau proteins. These findings provide important insights into PP-dependent neurodegeneration that may lead to novel therapeutic approaches to reduce the tauopathy associated with CTE.
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dbXrefs
sra-run  ERR1363288ERR1363334ERR1363335ERR1363336ERR1363337ERR1363338ERR1363339ERR1363340ERR1363341ERR1363342 More
sra-submission  ERA606798ERA606800ERA606801
biosample  SAMEA3931516SAMEA3931518SAMEA3931519SAMEA3931520SAMEA3931521SAMEA3931522SAMEA3931523SAMEA3931524SAMEA3931525SAMEA3931526 More
sra-study  ERP015139
sra-sample  ERS1118650ERS1118652ERS1118653ERS1118654ERS1118655ERS1118656ERS1118657ERS1118658ERS1118659ERS1118660 More
sra-experiment  ERX1434558ERX1434604ERX1434605ERX1434606ERX1434607ERX1434608ERX1434609ERX1434610ERX1434611ERX1434612 More
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status public
visibility unrestricted-access
dateCreated 2017-06-27T00:00:00Z
dateModified 2017-06-27T00:00:00Z
datePublished