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identifier PRJEB13897
type bioproject
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title Inactivation of blaNDM-1-positive and blaNDM-1-negative Escherichia coli strains and their differential gene expression upon solar irradiation
description Treated municipal wastewater is implicated in the dissemination of antibiotic-resistant bacteria (ARB) into the environment, and can impose a concern if the treated wastewater were to be reused for agricultural irrigation. This study examined the decay kinetics and molecular responses of a blaNDM-1-positive E. coli PI-7 isolated from wastewater and another blaNDM-1-negative commensal E. coli DSM 1103 upon solar irradiation. Our results found that in buffer solution, the NDM-1 containing E. coli displayed a longer lag-phase prior to decay and a longer half-life compared with the blaNDM-1-negative commensal E. coli (6.64 ± 0.63 h and 2.85 ± 0.46 min vs. 6.64 ± 0.63 h and 2.85 ± 0.46 min). Although solar irradiation remains useful and effective in reducing E. coli cell numbers by more than 5-log in less than 24 h, transcriptomics revealed differences in the overall upregulation of genes between both E. coli strains. A wider arsenal of genes related to oxidative stress, cellular repair and protective mechanisms were upregulated in E. coli PI-7 compared to DSM 1103. Subpopulations of the E. coli PI-7 expressed genes related to dormancy and persister cells formation during the late decay phase, which may have accounted for the prolonged persistence of E. coli PI-7. Upon prolonged solar irradiance, both E. coli strains displayed upregulation of genes related to horizontal gene transfer and antibiotic resistance. Virulence functions unique to blaNDM-1-positive E. coli PI-7 were also upregulated. Our findings collectively indicate that there is a need to place heightened level of concern on dissemination risks arising from the different types of ARB that may still remain viable in the treated wastewater despite having been subjected to solar irradiation.
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dbXrefs
sra-run  ERR1404126ERR1404127ERR1404128ERR1404129ERR1404130ERR1404131ERR1404132ERR1404133ERR1404134ERR1404135 More
sra-submission  ERA618201
biosample  SAMEA3959053SAMEA3959054SAMEA3959055SAMEA3959056SAMEA3959057SAMEA3959058SAMEA3959059SAMEA3959060SAMEA3959061SAMEA3959062 More
sra-study  ERP015480
sra-sample  ERS1146187ERS1146188ERS1146189ERS1146190ERS1146191ERS1146192ERS1146193ERS1146194ERS1146195ERS1146196 More
sra-experiment  ERX1475385ERX1475386ERX1475387ERX1475388ERX1475389ERX1475390ERX1475391ERX1475392ERX1475393ERX1475394 More
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status public
visibility unrestricted-access
dateCreated 2017-03-24T00:00:00Z
dateModified 2017-03-24T00:00:00Z
datePublished