home > bioproject > PRJEB14418
identifier PRJEB14418
type bioproject
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title EIF2S2 retroposition underlies fleece variation in sheep through the formation of dsRNA
description Fleece variation, in composition and structure, observed in mammals is a consequence of a strong selective pressure for fiber production after domestication. Wild species with double coated fleece produced a variety of breeds with single coated fleece. In sheep, these two categories discriminate primitive sheep from woolly modern sheep (Ovis aries). Nowadays, fleece variation is segregating in the Romane breed with lambs owning a coat either long and hairy (characteristic of ancestral sheep) or short and woolly (typical to domestic sheep). Here we report that the “woolly” allele results from the insertion of an antisense EIF2S2 (Eukaryotic Translation Initiation Factor 2, Subunit 2 Beta) retrogene (called asEIF2S2) into the 3’ UTR of the IRF2BP2 (Interferon Regulatory Factor 2 Binding Protein 2) gene leading to an abnormal IRF2BP2 transcript. We provide evidence that this chimeric IRF2BP2/asEIF2S2 messenger, by targeting the genuine sense EIF2S2 RNA and creating a long endogenous double-stranded RNA, alters the expression of EIF2S2 mRNA. This is the first example, to our knowledge of a phenotype arising from the modulation of messengers accumulation via a RNA-RNA hybrid itself generated through a retroposition gene mechanism. Altogether our results bring new insights on (i) the mammalian hair morphogenesis with the identification of EIF2S2 and IRF2BP2 as novel key regulators and (ii) the sheep population history thanks to the characterization of the molecular origin of an evolutionary phenotypic variation. Furthermore, these findings will contribute to a sustainable sheep production system since lambs carrying a hairy fleece are more adapted and robust to environmental harsh conditions.
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publication
Genome-Wide Identification of the Mutation Underlying Fleece Variation and Discriminating Ancestral Hairy Species from Modern Woolly Sheep.
properties 
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dbXrefs
sra-run  ERR1456961ERR1456962ERR1456963ERR1456964ERR1456965ERR1456966ERR1456967ERR1456968ERR1456969ERR1456970 More
sra-submission  ERA652496ERA1614254ERA2409700
biosample  SAMEA4034789SAMEA4034790SAMEA4034791SAMEA4034792SAMEA4034793SAMEA4034794SAMEA4034795SAMEA4949193SAMEA4949194SAMEA6623938 More
sra-study  ERP016060
sra-sample  ERS1205899ERS1205900ERS1205901ERS1205902ERS1205903ERS1205904ERS1205905ERS2767874ERS2767875ERS4386079 More
sra-experiment  ERX1527439ERX1527440ERX1527441ERX1527442ERX1527443ERX1527444ERX1527445ERX1527446ERX1527447ERX1527448 More
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status public
visibility unrestricted-access
dateCreated 2017-03-26T00:00:00Z
dateModified 2017-03-26T00:00:00Z
datePublished