home > bioproject > PRJEB14756
identifier PRJEB14756
type bioproject
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title Diet influences the composition and diversity of mucosa-associated microbiota along the longitudinal axis of the pig gastrointestinal tract.
description Mucosa-associated microbial populations of the gastrointestinal tract occupy a unique position allowing intimate contact with host epithelial cells lining the gastrointestinal tract. This proximity gives these populations a much higher potential, than the luminal microbiota, in exerting effects on the host. The functional characteristics of the microbiota and the influences of host-derived factors shape the composition and activity of the mucosa-associated bacterial community. We have shown previously that inclusion of a low calorie sweetener, SUCRAM, routinely included in the diet of weaning piglets modulates the composition of luminal-residing gut microbiota, with implications of reducing weaning-related gastrointestinal disorders in pigs. In this study, we have used high throughput Illumina sequencing to characterise the mucosa-associated microbiota along the length of the intestinal tract of weaning piglets and determined the effect of SUCRAM supplementation on mucosa-associated populations. We show that there are clear distinctions in the composition of mucosa-associated microbiota between the small and large intestine, and that there are significant differences in the composition of mucosa-associated compared to luminal microbiota in pig caecum. Dietary supplementation with SUCRAM had a profound effect on mucosa-associated bacterial community structure along the entire length of the intestinal tract. Most notably, there was a substantial reduction in predominant Campylobacter populations proposing that SUCRAM supplementation of swine diet has potential for reducing meat contamination and promoting food safety.
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dbXrefs
sra-run  ERR1709250ERR1709251ERR1709252ERR1709253ERR1709254ERR1709255ERR1709256ERR1709257ERR1709258ERR1709259 More
sra-submission  ERA740592
biosample  SAMEA4520430SAMEA4520431SAMEA4520432SAMEA4520433SAMEA4520434SAMEA4520435SAMEA4520436SAMEA4520437SAMEA4520438SAMEA4520439 More
sra-study  ERP016424
sra-sample  ERS1419609ERS1419610ERS1419611ERS1419612ERS1419613ERS1419614ERS1419615ERS1419616ERS1419617ERS1419618 More
sra-experiment  ERX1779484ERX1779485ERX1779486ERX1779487ERX1779488ERX1779489ERX1779490ERX1779491ERX1779492ERX1779493 More
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status public
visibility unrestricted-access
dateCreated 2017-07-02T00:00:00Z
dateModified 2017-07-02T00:00:00Z
datePublished