home > bioproject > PRJEB14870
identifier PRJEB14870
type bioproject
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title Time series RNA-seq of temperature-entrained and light-entrained bloodstream and procyclic form Trypanosoma brucei cultures
description To address whether T. brucei has a circadian clock we probed its transcriptome by RNA-seq, searching for transcripts oscillating with a 24 hr period. For this we entrained/ synchronized parasites in vitro for three days using temperature and light as environmental stimuli and then collected parasite RNA every four hours for two consecutive days. Parasite RNA was subjected to RNA-seq analysis. We performed this protocol on two stages of the T. brucei life cycle (bloodstream and insect procyclic forms).
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dbXrefs
sra-run  ERR1544456ERR1544457ERR1544458ERR1544459ERR1544460ERR1544461ERR1544462ERR1544463ERR1544464ERR1544465 More
sra-submission  ERA676218
biosample  SAMEA4350600SAMEA4350601SAMEA4350602SAMEA4350603SAMEA4350604SAMEA4350605SAMEA4350606SAMEA4350607SAMEA4350608SAMEA4350609 More
sra-study  ERP016547
sra-sample  ERS1262049ERS1262050ERS1262051ERS1262052ERS1262053ERS1262054ERS1262055ERS1262056ERS1262057ERS1262058 More
sra-experiment  ERX1615221ERX1615222ERX1615223ERX1615224ERX1615225ERX1615226ERX1615227ERX1615228ERX1615229ERX1615230 More
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status public
visibility unrestricted-access
dateCreated 2017-02-15T00:00:00Z
dateModified 2017-02-15T00:00:00Z
datePublished