home > bioproject > PRJEB15114
identifier PRJEB15114
type bioproject
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organism
title Transcriptomic profiling of human purified intestinal epithelial samples and organoids from paediatric and foetal small and large intestine
description Human intestinal epithelial organoids (IEO) culture models are rapidly emerging as novel experimental tools to investigate fundamental aspects of intestinal epithelial (patho)physiology. Cellular source and culture protocols vary between different IEO models and reliable markers for their characterization/validation are currently limited. Here, we provide the following reference datasets of transcriptomic profiling by RNA-sequencing: Purified intestinal epithelial cells (EpCAM+) from paediatric ileum and colon, Intestinal organoid cultures from paediatric ileum and colon, Purified intestinal epithelial cells (EpCAM+) from foetal small intestine and foetal large intestine, Intestinal organoid cultures from foetal small intestine and foetal large intestine, Intestinal organoid cultures derived from induced pluripotent stem cells.
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dbXrefs
sra-run  ERR1578721ERR1578722ERR1578723ERR1578724ERR1578725ERR1578726ERR1578727ERR1578728ERR1578729ERR1578730 More
sra-submission  ERA688181
biosample  SAMEA4378331SAMEA4378332SAMEA4378333SAMEA4378334SAMEA4378335SAMEA4378336SAMEA4378337SAMEA4378338SAMEA4378339SAMEA4378340 More
sra-study  ERP016816
sra-sample  ERS1289780ERS1289781ERS1289782ERS1289783ERS1289784ERS1289785ERS1289786ERS1289787ERS1289788ERS1289789 More
sra-experiment  ERX1649477ERX1649478ERX1649479ERX1649480ERX1649481ERX1649482ERX1649483ERX1649484ERX1649485ERX1649486 More
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status public
visibility unrestricted-access
dateCreated 2017-11-01T00:00:00Z
dateModified 2017-11-01T00:00:00Z
datePublished