home > bioproject > PRJEB15342
identifier PRJEB15342
type bioproject
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title MiR319, miR390, and miR393 are involved in aluminum response of flax (Linum usitatissimum L.)
description Acid soils limit agricultural production all over the world. Major reason of crop losses in acid soils is toxicity of aluminum (Al). In the present work, we investigated expression alterations of microRNAs in flax (Linum usitatissimum L.) plants under Al exposure. Flax seedlings of resistant and susceptible to Al lines and cultivars were exposure in AlCl3 solution for 4 and 24 hours. Twelve small RNA libraries were constructed and sequenced using Illumina GAIIx. In total, 97 miRNAs from 18 conserved families were predicted. Definite regularities were revealed for expression alterations of miR319, miR390 and miR393 in flax plants under Al exposure. Moreover, diverse expression alterations were revealed for miR390 and miR393 in susceptible and resistant to Al genotypes. Thus, the involvement of miR319, miR390 and miR393 in response to Al stress in flax was shown for the first time. We firstly identified TCPs as potential targets for miR319, TAS3 and GRF5 as potential targets of miR390, and AFB2 as potential targets for miR393 in flax. TCPs, TAS3, GRF5, and AFB2 participate in regulation of plant growth and development. We discussed that miR319, miR390, and miR393 play important role in Al response via regulation of growth processes in flax plants.
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dbXrefs
sra-run  ERR1611433ERR1611434ERR1611435ERR1611436ERR1611437ERR1611438ERR1611439ERR1611440ERR1611441ERR1611442 More
sra-submission  ERA697617
biosample  SAMEA4426210SAMEA4426211SAMEA4426212SAMEA4426213SAMEA4426214SAMEA4426215SAMEA4426216SAMEA4426217SAMEA4426218SAMEA4426219 More
sra-study  ERP017058
sra-sample  ERS1337659ERS1337660ERS1337661ERS1337662ERS1337663ERS1337664ERS1337665ERS1337666ERS1337667ERS1337668 More
sra-experiment  ERX1682009ERX1682010ERX1682011ERX1682012ERX1682013ERX1682014ERX1682015ERX1682016ERX1682017ERX1682018 More
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visibility unrestricted-access
dateCreated 2017-02-18T00:00:00Z
dateModified 2017-02-18T00:00:00Z
datePublished