home > bioproject > PRJEB15554
identifier PRJEB15554
type bioproject
sameAs
organism
title Niche partitioning of diverse sulfur oxidizing bacteria at hydrothermal vents
description In the dark ocean primary production is carried out by chemolithoautotrophic microorganisms, with the oxidation of reduced sulfur compounds being a major driver for microbial carbon fixation. At highly sulfidic hydrothermal fields a variety of microorganisms oxidizing sulfur compounds can be observed in high abundance. Yet, the principles of niche differentiation and distribution of the different sulfur-oxidizing prokaryotes (SOP) across geochemical gradients remain poorly understood.We addressed niche differentiation of SOP by extensive sampling of active sulfidic vents at six different hydrothermal venting sites in the Manus Basin, in Papua New Guinea. For this study, we collected 33 diffuse fluid and rising plume samples, and 23 samples from surfaces of chimneys, rocks and fauna. Based on our detailed analyses of 16S RNA gene sequences, metagenomes and real-time in situ measured geochemical parameters, we are now able to describe the distribution and potential niches of SOP from the highly diverse Epsilonproteobacteria genera Sulfurimonas and Sulfurovum and the rather uniform SUP05-clade Gammaproteobacteria within the geochemical mixing gradient. While Sulfurovum was mainly found attached to surfaces exposed to diffuse venting, the SUP05-clade was found to be planktonic in areas of high dilution of the vent fluids by entrained seawater. We further propose that the high diversity within Sulfurimonas and Sulfurovum related bacteria observed in this study derives from the high variation of environmental parameters such as sulfide concentrations across small spatial and temporal scales within their niche.
data type Genome sequencing and assembly
organization
publication
properties 
{...}
dbXrefs
sra-run  ERR1665221ERR1665222ERR1665223ERR1665224ERR1665225ERR1665226ERR1665227ERR1665228ERR1665229ERR1665230 More
sra-submission  ERA714119ERA730832
biosample  SAMEA4473285SAMEA4473286SAMEA4473287SAMEA4473288SAMEA4473289SAMEA4473290SAMEA4473291SAMEA4473292SAMEA4473293SAMEA4473294 More
sra-study  ERP017367
sra-sample  ERS1372464ERS1372465ERS1372466ERS1372467ERS1372468ERS1372469ERS1372470ERS1372471ERS1372472ERS1372473 More
sra-experiment  ERX1735538ERX1735539ERX1735540ERX1735541ERX1735542ERX1735543ERX1735544ERX1735545ERX1735546ERX1735547 More
distribution JSONJSON-LD
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status public
visibility unrestricted-access
dateCreated 2017-03-25T00:00:00Z
dateModified 2017-03-25T00:00:00Z
datePublished