home > bioproject > PRJEB19784
identifier PRJEB19784
type bioproject
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title High resolution survey of drought, high salinity, heat and cold stress-induced transcriptome of bioenergy feedstock model plant western poplar (Populus trichocarpa) accession Nisqually-1
description Abiotic stress is a major factor affecting the growth, development, yield and quality in plants including the important biomass yield such as in a bioenergy feedstock crops. In a first of its kind, RNA-seq based high resolution survey of abiotic stress-induced transcriptome of bioenergy feedstock model plant western poplar (Populus trichocarpa accesion Nisqually-1) was carried out by way of 81 libraries made from total RNA isolated from three tissues, mature vascular leaf, stem xylem and root sampled from plants subjected to untreated control and treated with four individual stress treatments cold, heat, drought and high salinity. For every tissue and treatment type including controls, three individual plants were used per treatment as biological replicates. This research project is supported by the DOE Office of Science, Office of Biological and Environmental Research (BER), USA, grant no. DE-SC0008570
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dbXrefs
sra-run  ERR1864411ERR1864412ERR1864413ERR1864414ERR1864415ERR1864416ERR1864417ERR1864418ERR1864419ERR1864420 More
sra-submission  ERA828785
biosample  SAMEA102871168SAMEA102871918SAMEA102872668SAMEA102873418SAMEA102874168SAMEA102874918SAMEA102875668SAMEA102876418SAMEA102877168SAMEA102877918 More
sra-study  ERP021848
sra-sample  ERS1575276ERS1575277ERS1575278ERS1575279ERS1575280ERS1575281ERS1575282ERS1575283ERS1575284ERS1575285 More
sra-experiment  ERX1925298ERX1925299ERX1925300ERX1925301ERX1925302ERX1925303ERX1925304ERX1925305ERX1925306ERX1925307 More
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status public
visibility unrestricted-access
dateCreated 2018-01-11T00:00:00Z
dateModified 2018-01-11T00:00:00Z
datePublished