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identifier PRJEB21578
type bioproject
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organism
title Influence of pig farming on the human's nasal microbiota: The key role of the airborne microbial communities
description We performed a study comparing the nasal microbiota of pigs with the air microbiota in pig-farmers and the nasal microbiota of individuals working in these pig farms in Switzerland. Pig farms (n=28) were visited in 2014 and 2015 and in total nasal swabs from 43 pig-farmers and 53 pigs were collected and air samples from 26 farms. As controls, nasal swabs from 16 cow-farmers and 26 individuals with no contact to farm animals were collected. Analysis of the microbiota was performed based on 16S rRNA high-throughput sequencing. Distinctly different bacterial communities were found in nasal samples from pig farmers compared to non-exposed individuals and cow farmers. Eighty-two Sequence Variants which predominantly occured in samples from pig farms were identified.
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dbXrefs
sra-run  ERR2020092ERR2020093ERR2020094ERR2020095ERR2020096ERR2020097ERR2020098ERR2020099ERR2020100ERR2020101 More
sra-submission  ERA966093
biosample  SAMEA104144182SAMEA104144183SAMEA104144184SAMEA104144185SAMEA104144186SAMEA104144187SAMEA104144188SAMEA104144189SAMEA104144190SAMEA104144191 More
sra-study  ERP023844
sra-sample  ERS1803200ERS1803201ERS1803202ERS1803203ERS1803204ERS1803205ERS1803206ERS1803207ERS1803208ERS1803209 More
sra-experiment  ERX2079339ERX2079340ERX2079341ERX2079342ERX2079343ERX2079344ERX2079345ERX2079346ERX2079347ERX2079348 More
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status public
visibility unrestricted-access
dateCreated 2018-02-21T00:00:00Z
dateModified 2018-02-21T00:00:00Z
datePublished