home > bioproject > PRJEB21671
identifier PRJEB21671
type bioproject
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title Lotus japonicus response to Nod factor: wild type and nfre mutants
description For RNA sequencing, 3 days seedlings were moved to agar plates supplemented with 1/4 B&D media and susceptible zone of 14 days-old plants was harvested after specific treatment with water (Mock treated) or M.loti Nod factor 10-8M (NF). The total RNA was isolated from the susceptible zone (15 mm root pieces) using Nucleo spin RNA plant (Macherey-Nagel). Total RNA (> 0.8 µg) from two biological replicas per sample was used by GATC Biotech (Germany) to prepare random primed cDNA library and for sequencing with Illumina HiSeq: read length 1 x 50bp. Gifu- L. japonicus wild-type, 4820- nfre-1 allele of Nfre, 38534- nfre-2 allele of Nfre.
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{...}
dbXrefs
sra-run  ERR2026889ERR2026890ERR2026891ERR2026892ERR2026893ERR2026894ERR2026895ERR2026896ERR2026897ERR2026898 More
sra-submission  ERA971962
biosample  SAMEA104153085SAMEA104153086SAMEA104153087SAMEA104153088SAMEA104153089SAMEA104153090SAMEA104153091SAMEA104153092SAMEA104153093SAMEA104153094 More
sra-study  ERP023945
sra-sample  ERS1812103ERS1812104ERS1812105ERS1812106ERS1812107ERS1812108ERS1812109ERS1812110ERS1812111ERS1812112 More
sra-experiment  ERX2086041ERX2086042ERX2086043ERX2086044ERX2086045ERX2086046ERX2086047ERX2086048ERX2086049ERX2086050 More
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status public
visibility unrestricted-access
dateCreated 2018-06-28T00:00:00Z
dateModified 2018-06-28T00:00:00Z
datePublished