home > bioproject > PRJEB2208
identifier PRJEB2208
type bioproject
sameAs
organism
title Zebrafish gene 3 prime end pull down for genome annotation
description Abstract: As part of the zebrafish genome annotation project the 3 prime ends of genes were pulled down on polyT beads and sequenced on the Illumina Genome Analyzer to identify alternative 3 prime ends in a range of tissues and developmental stages. Study description: Total RNA from a range of developmental stages and adult tissues were chemically fragmented, pulled down on polyT magnetic beads and double stranded cDNA was synthesized. The cDNA was BpmI digested to release from the beads and to leave a 6 T base tail. Illumina sequencing libraries were made followed by 76 base paired-end sequencing. This data is part of a pre-publication release. For information on the proper use of pre-publication data shared by the Wellcome Trust Sanger Institute (including details of any publication moratoria), please see http://www.sanger.ac.uk/datasharing/
data type Transcriptome or Gene expression
organization
publication
properties 
{...}
dbXrefs
sra-run  ERR015562ERR015563ERR015564ERR015565ERR015566ERR015567ERR015568
sra-submission  ERA010603
biosample  SAMEA898401SAMEA898403SAMEA898404SAMEA980815SAMEA708832SAMEA708835SAMEA708829
sra-study  ERP000263
sra-sample  ERS012705ERS012707ERS012706ERS012704ERS000090ERS000089ERS000087
sra-experiment  ERX005932ERX005934ERX005933ERX005929ERX005931ERX005930ERX005928
distribution JSONJSON-LD
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status public
visibility unrestricted-access
dateCreated 2010-08-19T01:00:00Z
dateModified 2010-08-19T01:00:00Z
datePublished 2010-08-19T01:00:00Z