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identifier PRJEB22166
type bioproject
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title A Phylogenetically Based Comparative Transcriptional Landscape of Maize and Sorghum Obtained by Single-molecule Sequencing
description Maize and sorghum are both important crops with similar overall plant architectures, but they have key differences, especially in regard to their inflorescences. To better understand these two organisms at the molecular level, we compared the expression profiles of both protein-coding and non-coding transcripts in 11 matched tissues using single-molecule long-read and deep RNA sequencing. In this study, maize B73 line was planted at Cold Spring Harbor Laboratory upland farm, 11 tissues together with previously reported six tissues were collected, RNA was extracted, library was made and sequenced on the HiSeq 2500 PE125 platform at Woodbury Genome Center.
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dbXrefs
sra-run  ERR2096632ERR2096633ERR2096634ERR2096635ERR2096636ERR2096637ERR2096638ERR2096639ERR2096640ERR2096641 More
sra-submission  ERA987860
biosample  SAMEA104212555SAMEA104212556SAMEA104212557SAMEA104212558SAMEA104212559SAMEA104212560SAMEA104212561SAMEA104212562SAMEA104212563SAMEA104212564 More
sra-study  ERP024506
sra-sample  ERS1871573ERS1871574ERS1871575ERS1871576ERS1871577ERS1871578ERS1871579ERS1871580ERS1871581ERS1871582 More
sra-experiment  ERX2154015ERX2154016ERX2154017ERX2154018ERX2154019ERX2154020ERX2154021ERX2154022ERX2154023ERX2154024 More
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status public
visibility unrestricted-access
dateCreated 2018-04-06T00:00:00Z
dateModified 2018-04-06T00:00:00Z
datePublished