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identifier PRJEB2492
type bioproject
sameAs
organism
title Genomic_variation_in_a_global_set_of_Salmonella_Paratyphi_A_isolates
description Salmonella Paratyphi A is the causative agent of paratyphoid fever, a disease virtually indistinguishable from typhoid fever. Over the past decade the incidence of paratyphoid fever caused by Salmonella Paratyphi A has increased dramatically, and in some areas has surpassed typhoid fever incidence.Salmonella Paratyphi A is genetically monomorphic, with the first two finished genome sequences differing by fewer than 200 single nucleotide polymorphisms and very few insertions or deletions. Very few molecular typing tools are able to differentiate among Salmonella Paratyphi A isolates at all, with phage typing, ribotyping and PFGE showing limited discriminatory power.In order to identify sequence polymorphisms within the global Salmonella Paratyphi A population, a total of 155 novel isolates of Paratyphi A were assembled for whole genome sequencing using multiplex Illumina/Solexa sequencing.http://www.sanger.ac.uk/resources/downloads/bacteria/salmonella.html
data type Other
organization
publication
properties 
{...}
dbXrefs
sra-run  ERR033908ERR033909ERR033910ERR033911ERR033912ERR033913ERR033914ERR033915ERR033916ERR033917 More
sra-submission  ERA029316ERA135582ERA201067
biosample  SAMN00009845SAMEA806648SAMEA806656SAMEA806802SAMEA806649SAMEA806767SAMEA806768SAMEA806800SAMEA806801SAMEA806798 More
sra-study  ERP000612
sra-sample  SRS024887ERS001530ERS001522ERS001521ERS001531ERS001529ERS001528ERS001527ERS001526ERS001525 More
sra-experiment  ERX012606ERX2003465ERX2003474ERX2003475ERX2003476ERX2003466ERX2003467ERX2003468ERX2003469ERX2003470 More
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status public
visibility unrestricted-access
dateCreated 2011-04-28T01:00:00Z
dateModified 2011-04-28T01:00:00Z
datePublished 2011-04-28T01:00:00Z