home > bioproject > PRJEB2578
identifier PRJEB2578
type bioproject
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organism
title Resequencing of 462 accessions from world-wide germplasm collection
description We used a much broader and larger sample of world-wide rice cultivars including Oryza sativa indica and japonica subspecies to perform genome-wide association studies for complex traits in rice. The collected samples contained five divergent groups - indica, aus, temperate japonica, tropical japonica (also named javanica) and aromatic. This study demonstrates that genome-wide association studies based on large-scale re-sequencing provide a powerful platform for finding genetic variants that can be applied directly for crop improvement.
data type Other
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publication
A map of rice genome variation reveals the origin of cultivated rice.
properties 
{...}
dbXrefs
sra-run  ERR036606ERR036607ERR036608ERR036609ERR036610ERR036611ERR036612ERR036613ERR036614ERR036615 More
sra-submission  ERA035189ERA081006
biosample  SAMEA1031038SAMEA1031050SAMEA1031071SAMEA1031091SAMEA1030986SAMEA1030967SAMEA1030955SAMEA1031017SAMEA1031000SAMEA1030925 More
sra-study  ERP000729
sra-sample  ERS037511ERS037512ERS037513ERS037514ERS037515ERS037516ERS037517ERS037518ERS037519ERS037520 More
sra-experiment  ERX014178ERX014179ERX014180ERX014181ERX014182ERX014183ERX014184ERX014185ERX014186ERX014187 More
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status public
visibility unrestricted-access
dateCreated 2011-09-30T00:00:00Z
dateModified 2011-09-30T00:00:00Z
datePublished 2011-09-30T00:00:00Z