home > bioproject > PRJEB31271
identifier PRJEB31271
type bioproject
sameAs
organism
title Genomic Epidemiology of Clostridium difficile RT027/ST01 strains from Chile, Honduras And Mexico
description Clostridioides difficile is a Gram-positive, strictly anaerobic, and spore-forming bacterial pathogen. C. difficile infections (CDI) are nowadays the most common cause of healthcare-associated infections in several countries and gave gained notoriety on account of their morbidity, mortality and the heavy financial burden that they impose to health systems. Several studies published in 2005 linked several severe infections and epidemics in North America and Europe to a group of similar isolates classified as BI/NAP1/027/ST1. However, nearly all in-depth studies on the molecular epidemiology of this epidemic strain have been conducted in Europe and the United States; thus, the origin, date of introduction, and diversity of BI/NAP1/027/ST1 strains in Chile remain obscure. The dataset comprises clinical isolates from patients with CDI from a clinical hospital. This study could provide insight into the presence, establishment and evolution of the epidemic clone BI/NAP1/027/ST1 in Chile, Honduras And Mexico.
data type Genome sequencing and assembly
organization
publication
properties 
{...}
dbXrefs
sra-run  ERR3218729ERR3218730ERR3218731ERR3218732ERR3218733ERR3771757ERR3771758ERR3771759ERR3771760
sra-submission  ERA1765148ERA2324259
biosample  SAMEA5418175SAMEA5418172SAMEA5418174SAMEA5418176SAMEA5418173SAMEA6427935SAMEA6427932SAMEA6427933SAMEA6427934
sra-study  ERP113803
sra-sample  ERS3223469ERS3223470ERS3223471ERS3223472ERS3223473ERS4194140ERS4194139ERS4194138ERS4194137
sra-experiment  ERX3246247ERX3246248ERX3246249ERX3246250ERX3246251ERX3773506ERX3773507ERX3773508ERX3773509
distribution JSONJSON-LD
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status public
visibility unrestricted-access
dateCreated 2019-10-11T00:00:00Z
dateModified 2019-10-11T00:00:00Z
datePublished