home > bioproject > PRJEB31833
identifier PRJEB31833
type bioproject
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organism
title Vaginal metatranscriptome of bacterial mRNA from healthy and BV volunteers
description Bacterial vaginosis (BV) increases transmission of HIV, enhances the risk of preterm labour, and is associated with malodour. Clinical diagnosis often relies on microscopy to give a Nugent score, which provides a low-resolution examination of the microbial composition. We conducted a metatranscriptomic analysis of health and BV samples and find that the microbial composition and the functional capacity are similar but not identical. We find that there are two distinct types of BV at the functional level, and that the various types of healthy microbiomes are rather similar at the functional level.
data type Other
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{...}
dbXrefs
sra-run  ERR3244796ERR3244797ERR3244798ERR3244799ERR3244800ERR3244801ERR3244802ERR3244803ERR3244804ERR3244805 More
sra-submission  ERA1785261
biosample  SAMEA5532465SAMEA5532466SAMEA5532467SAMEA5532468SAMEA5532469SAMEA5532470SAMEA5532471SAMEA5532472SAMEA5532473SAMEA5532474 More
sra-study  ERP114440
sra-sample  ERS3334536ERS3334537ERS3334538ERS3334539ERS3334540ERS3334541ERS3334542ERS3334543ERS3334544ERS3334545 More
sra-experiment  ERX3271799ERX3271800ERX3271801ERX3271802ERX3271803ERX3271804ERX3271805ERX3271806ERX3271807ERX3271808 More
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status public
visibility unrestricted-access
dateCreated 2019-11-02T00:00:00Z
dateModified 2019-11-02T00:00:00Z
datePublished