home > bioproject > PRJEB31948
identifier PRJEB31948
type bioproject
sameAs
organism
title Structure and function of picoplankton and virus communities along zonal gradients in the South Pacific Ocean
description Picoplankton (0.2-2.7 µm fraction) and virus (<0.22 µm fraction) samples were obtained on the BiG-RAPA (Biogeochemical Gradients Role in Arranging Planktonic Assemblages) expedition in the late austral spring of 2010. Additional samples obtained during this expedition include whole community biomass (>0.22 µm fraction) samples that profile a deep (150 m) subsurface chlorophyll maximum in the South Pacific Gyre. High throughput, short read, shotgun sequencing was used to produce metagenomic data from the extracted DNA of these samples. These data enable the assessment of how picoplankton and viral populations are structured along strong physical and chemical gradients on a zonal transect from the upwelling along the western coast of South America to the oligotrophic gyre in the South Pacific.
data type Other
organization
publication
properties 
{...}
dbXrefs
sra-run  ERR3256922ERR3256923ERR3256924ERR3256925ERR3256926ERR3256927ERR3256928ERR3256929ERR3256930ERR3256931 More
sra-submission  ERA1803826
biosample  SAMEA5542730SAMEA5542732SAMEA5542734SAMEA5542736SAMEA5542742SAMEA5542744SAMEA5542754SAMEA5542756SAMEA5542731SAMEA5542733 More
sra-study  ERP114564
sra-sample  ERS3344788ERS3344790ERS3344792ERS3344794ERS3344800ERS3344802ERS3344812ERS3344814ERS3344789ERS3344791 More
sra-experiment  ERX3283661ERX3283662ERX3283663ERX3283664ERX3283665ERX3283666ERX3283667ERX3283668ERX3283669ERX3283670 More
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status public
visibility unrestricted-access
dateCreated 2019-10-23T00:00:00Z
dateModified 2019-10-23T00:00:00Z
datePublished