home > bioproject > PRJEB3232
identifier PRJEB3232
type bioproject
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organism
title Diversity, distribution and sources of bacteria in residential kitchens
description Bacteria readily colonize kitchen surfaces, and the exchange of microbes between humans and the kitchen environment can impact human health. However, we have a limited understanding of the overall diversity of these communities, how they differ across surfaces, and sources of bacteria to kitchen surfaces. Here we used high-throughput sequencing of the 16S rRNA gene to explore biogeographical patterns of bacteria across >80 surfaces within the kitchens of each of four households. In total, 34 bacterial and two archaeal phyla were identified, with most sequences belonging to the Actinobacteria, Bacteriodetes, Firmicutes and Proteobacteria. Genera known to contain common food-borne pathogens were low in abundance but broadly distributed throughout the kitchens, with different taxa exhibiting distinct distribution patterns. The most diverse communities were associated with infrequently cleaned surfaces such as fans above stoves, refrigerator/freezer door seals, and floors. In contrast, the least diverse communities were observed in and around sinks, which were dominated by biofilm-forming gram-negative lineages. Community composition was influenced by conditions on individual surfaces, usage patterns, and dispersal from source environments. Human skin was the primary source of bacteria across all kitchen surfaces, with contributions from food and faucet water dominating in a few specific locations. This study demonstrates that diverse bacterial communities are widely distributed in residential kitchens and that the composition of these communities is often predictable. From a public health perspective, these results illustrate the ease with which human- and food-associated bacteria are transferred in residential settings to surfaces, which could then act as pathogen reservoirs.
data type Other
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dbXrefs
sra-run  ERR165924ERR165925ERR165926ERR165927ERR165928ERR165929ERR165930ERR165931ERR165932ERR165933 More
sra-submission  ERA156386
biosample  SAMEA1487826SAMEA1487811SAMEA1487792SAMEA1487781SAMEA1487764SAMEA1487897SAMEA1487875SAMEA1487891SAMEA1487636SAMEA1487622 More
sra-study  ERP001751
sra-sample  ERS167623ERS167624ERS167625ERS167626ERS167627ERS167628ERS167629ERS167630ERS167631ERS167632 More
sra-experiment  ERX141804ERX141805ERX141806ERX141807ERX141808ERX141809ERX141810ERX141811ERX141812ERX141813 More
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status public
visibility unrestricted-access
dateCreated 2012-08-29T01:00:00Z
dateModified 2012-08-29T01:00:00Z
datePublished 2012-08-29T01:00:00Z